Protein ZmMADS65
ZmMADS65 is a protein in the MADS family.
Information
TF Name: ZmMADS65
Species: Maize
TF Family: MADS
Gene Name(Synonym): MADS65
Uniprot ID: A0A1D6PDQ1

Protein ZmMADS65

ZmMADS65 is a protein in the MADS family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d016650DAPseq no logo sequence fimo position
Zm00001d016650DAPseq no logo sequence fimo position
Zm00001d016650ChIPseq no logo sequence fimo position
Zm00001d016650PChIPseq no logo sequence fimo position

Interactions where ZmMADS65 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmMADS65 is the target  
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There are 3 protein-dna interactions that fit this criteria. download excel sheet

Zm00001d016650_T001 from maize genome v4

Amino Acid Sequence
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MAASSSSNSSPIGCLHPTLIFMRGTIVPNPMTPRSADSSCTHDLHPKRKDRLVERAPYARPVVPRGGAREEDGQAGLGLG
LLARARQHGLHLLPHRTQSPLARSPFNLQALILMYQLCNSVAFVHDPKVLHRELKLHILLKDHKTMVLKIADLSLSHAIS
SSWPRAPSRTLPPLSAWRSPLPTTATPHDCELVKSIKRHRVLFDEEGKIVVRRIDNSMSRQVTFSKRWNGLLKKMKELSI
LCDAKIGLIIISSTSMLYEFSNTKSSRFGRLQGVKRAIAGRNLYKRCSCSCSTGDAMGMNMISKDVLFVRVGGSGEQGSK
GEVACYIRLRHVWWRRAAGLGFVGNTLVEGDYLFVPSKCQGGIQRVHIIKGCVDGSLLLKILQEMEKEQ

MAASSSSNSSPIGCLHPTLIFMRGTIVPNPMTPRSADSSCTHDLHPKRKDRLVERAPYARPVVPRGGAREEDGQAGLGLG
LLARARQHGLHLLPHRTQSPLARSPFNLQALILMYQLCNSVAFVHDPKVLHRELKLHILLKDHKTMVLKIADLSLSHAIS
SSWPRAPSRTLPPLSAWRSPLPTTATPHDCELVKSIKRHRVLFDEEGKIVVRRIDNSMSRQVTFSKRWNGLLKKMKELSI
LCDAKIGLIIISSTSMLYEFSNTKSSRFGRLQGVKRAIAGRNLYKRCSCSCSTGDAMGMNMISKDVLFVRVGGSGEQGSK
GEVACYIRLRHVWWRRAAGLGFVGNTLVEGDYLFVPSKCQGGIQRVHIIKGCVDGSLLLKILQEMEKEQ

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available

Nucleotide Sequence
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ATGGCGGCCTCCAGCTCCTCCAACT...


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